Aliases : UBQ6, Zm00001e003606
Description : component RPS27a of SSU proteome
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00095p00146440 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
AT2G35635 | UBQ7, RUB2 | ubiquitin 7 | 0.04 | OrthoFinder output from all 47 species | |
AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.03 | OrthoFinder output from all 47 species | |
AT2G47110 | UBQ6 | ubiquitin 6 | 0.03 | OrthoFinder output from all 47 species | |
AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.03 | OrthoFinder output from all 47 species | |
AT3G62250 | UBQ5 | ubiquitin 5 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g023730 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g42134 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g18351 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Als_g45147 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Aob_g10329 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Aob_g18454 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g48963 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene54404.t1 | UBQ11, Aspi01Gene54404 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene54416.t1 | UBQ11, Aspi01Gene54416 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.21G057000.1 | UBQ6, Ceric.21G057000 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
Cre06.g273600 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.01 | OrthoFinder output from all 47 species | |
Dac_g08496 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g27156 | UBQ14 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g29246 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01012906001 | No alias | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01033876001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
Gb_01257 | No alias | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
Len_g04120 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g15980 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g17565 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g23474 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g26766 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g27408 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.08 | OrthoFinder output from all 47 species | |
MA_10435699g0030 | No alias | Ubiquitin-40S ribosomal protein S27a-1 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
MA_529552g0010 | UBQ6 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g16243 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g02121 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g02936 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Pp3c10_25270V3.1 | Pp3c10_25270 | ubiquitin extension protein 1 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c12_5640V3.1 | UBQ6, Pp3c12_5640 | ubiquitin 6 | 0.01 | OrthoFinder output from all 47 species | |
Pp3c12_5760V3.1 | UBQ6, Pp3c12_5760 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c20_23170V3.1 | Pp3c20_23170 | ubiquitin extension protein 1 | 0.02 | OrthoFinder output from all 47 species | |
Pp3c4_19000V3.1 | UBQ6, Pp3c4_19000 | ubiquitin 6 | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g25580 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g27106 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g55284 | UBQ4 | UBQ ubiquitin-fold protein & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Sam_g07360 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
Smo111605 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g098940.2.1 | UBQ6, Solyc12g098940 | component RPS27a of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g099025.1.1 | UBQ6, Solyc12g099025 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
Spa_g29979 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g43571 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e028916_P001 | UBQ6, Zm00001e028916 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |