LOC_Os03g22620 (Os03g0347900)


Aliases : Os03g0347900

Description : 16.1.5 secondary metabolism.isoprenoids.terpenoids Encodes a sesquiterpene synthase involved in generating all of the group A sesquiterpenes found in the Arabidopsis floral volatile blend. Strongly expressed in the stigma. terpene synthase 21 (TPS21)


Gene families : OG_01_0000052 (Gene family) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g22620
Cluster HCCA cluster: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01014325001 No alias 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.01 Gene family
LOC_Os04g27070 Os04g0339500 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.01 Gene family
Solyc06g059885.1.1 Solyc06g059885.1 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.01 Gene family
Solyc06g060180.2.1 Solyc06g060180.2 16.1.5 secondary metabolism.isoprenoids.terpenoids... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA InterProScan
MF GO:0010333 terpene synthase activity IEA InterProScan
MF GO:0016829 lyase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001906 Terpene_synth_N 2 52
IPR005630 Terpene_synthase_metal-bd 83 347
No external refs found!