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  5. Zm00001e003059_P001

Zm00001e003059_P001 (HYP1, ATHYP1, Zm00001e003059)


Aliases : HYP1, ATHYP1, Zm00001e003059

Description : calcium-permeable channel (OSCA)


Gene families : OG0000264 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000264_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e003059_P001

Target Alias Description ECC score Gene Family Method Actions
AT4G04340 No alias ERD (early-responsive to dehydration stress) family protein 0.04 OrthoFinder output from all 47 species
Ceric.1Z193300.1 Ceric.1Z193300 not classified & original description: pacid=50634950... 0.04 OrthoFinder output from all 47 species
Cre08.g360500 No alias CSC1-like protein At1g62320 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre17.g738150 ERD4 CSC1-like protein At1g32090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Dcu_g19010 ERD4 calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030477001 No alias Solute transport.channels.OSCA calcium-permeable channel 0.06 OrthoFinder output from all 47 species
LOC_Os01g72210.1 LOC_Os01g72210 calcium-permeable channel (OSCA) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42820.1 LOC_Os10g42820 calcium-permeable channel (OSCA) 0.06 OrthoFinder output from all 47 species
Msp_g06040 No alias calcium-permeable channel *(OSCA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13639 No alias calcium-permeable channel *(OSCA) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e012117_P001 RXW8, Zm00001e012117 calcium-permeable channel (OSCA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032880 Csc1/OSCA1-like_N 6 153
IPR003864 CSC1/OSCA1-like_7TM 340 604
IPR027815 CSC1/OSCA1-like_cyt 174 327
No external refs found!