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  5. Zm00001e002946_P001

Zm00001e002946_P001 (ACT8, Zm00001e002946)


Aliases : ACT8, Zm00001e002946

Description : Actin-7 OS=Oryza sativa subsp. japonica (sp|p0c540|act7_orysj : 139.0)


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002946_P001

Target Alias Description ECC score Gene Family Method Actions
Dcu_g24198 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23151 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g36388 ACT11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05287 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06007 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 3 71
No external refs found!