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Aliases : Zm00001e002844
Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 133.0)
Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G40490 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g074128 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g24129 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g50168 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g12260 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g08667 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g008091 | No alias | not classified & original description: CDS=1-1311 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0149.g053226 | No alias | not classified & original description: CDS=547-1935 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0288.g063213 | No alias | not classified & original description: CDS=60-1199 | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G049700.1 | Ceric.30G049700 | not classified & original description: pacid=50608801... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G060600.1 | Ceric.35G060600 | not classified & original description: pacid=50581737... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G044000.1 | Ceric.36G044000 | not classified & original description: pacid=50569069... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001130.27 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Cre07.g330300 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Cre10.g428200 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g31601 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g16933 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012784001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028394001 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35079 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03813 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g13554 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g19867 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g45356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g24251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10432683g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_125759g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.06 | OrthoFinder output from all 47 species | |
| MA_68291g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| MA_93349g0010 | No alias | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g22584 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g03296 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g31234 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02420 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0054.g014264 | No alias | not classified & original description: CDS=1-1203 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0077.g017618 | No alias | not classified & original description: CDS=1-1296 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24620 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g44185 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g121710.2.1 | Solyc03g121710 | Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21542 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57064 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006479 | protein methylation | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| BP | GO:0008213 | protein alkylation | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016571 | histone methylation | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034968 | histone lysine methylation | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| No external refs found! |