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  5. Zm00001e002598_P001

Zm00001e002598_P001 (Zm00001e002598)


Aliases : Zm00001e002598

Description : no hits & (original description: none)


Gene families : OG0000127 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000127_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002598_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00257160 PUB26,... U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G35930 PUB23 plant U-box 23 0.03 OrthoFinder output from all 47 species
AT3G11840 PUB24 plant U-box 24 0.03 OrthoFinder output from all 47 species
AT3G18710 PUB29, ATPUB29 plant U-box 29 0.04 OrthoFinder output from all 47 species
AT3G19380 PUB25 plant U-box 25 0.05 OrthoFinder output from all 47 species
AT3G52450 PUB22 plant U-box 22 0.02 OrthoFinder output from all 47 species
Aev_g02974 PUB23 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09134 PUB25 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g62359 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43217.t1 Aspi01Gene43217 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g56659 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G065500.1 PUB26, Ceric.08G065500 U-Box-group-III E3 ubiquitin ligase & original... 0.03 OrthoFinder output from all 47 species
Dcu_g11691 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g18954 PUB25 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g18955 PUB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24916 PUB25 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21913 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011140001 PUB23 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01026764001 PUB22 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_11650 PUB26 U-box domain-containing protein 26 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_27794 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_33334 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os04g34030.1 PUB23, LOC_Os04g34030 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os12g06410.1 PUB24, LOC_Os12g06410 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g01213 PUB25 U-Box-group-III E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425865g0010 PUB25 U-box domain-containing protein 25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_10432981g0010 PUB22 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_7928010g0010 PUB23 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_9494855g0010 PUB26 U-box domain-containing protein 25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_95662g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_95662g0020 PUB25 U-box domain-containing protein 27 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g29544 PUB23 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g34239 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g12004 PUB26 U-Box-group-III E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04485 PUB26 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g007010.2.1 PUB22, Solyc01g007010 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g007020.4.1 PUB23, Solyc01g007020 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g007040.4.1 PUB22, Solyc01g007040 E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc01g107980.3.1 PUB26, Solyc01g107980 U-box domain-containing protein 25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc11g005700.1.1 CMPG2, ATCMPG2,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Spa_g03410 PUB26 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015763_P001 Zm00001e015763 U-box domain-containing protein 21 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e039417_P001 PUB23, Zm00001e039417 E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!