Zm00001e002321_P001 (Zm00001e002321)

Aliases : Zm00001e002321

Description : no hits & (original description: none)

Gene families : OG0001115 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001115_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e002321_P001

Target	Alias	Description	ECC score	Gene Family Method
AT5G27820	No alias	Ribosomal L18p/L5e family protein	0.04	OrthoFinder output from all 47 species
Adi_g017855	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g08182	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g24671	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Ceric.02G007100.1	Ceric.02G007100	component *(uL18m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
LOC_Os01g15290.1	LOC_Os01g15290	component mtRPL18 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os03g48840.3	LOC_Os03g48840	component mtRPL18 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
LOC_Os10g41050.1	LOC_Os10g41050	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Len_g02155	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g07696	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.03	OrthoFinder output from all 47 species
MA_13210g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp2g03750.1	No alias	component mtRPL18 of large ribosomal subunit proteome	0.04	OrthoFinder output from all 47 species
Nbi_g25760	No alias	component *(uL18m) of large mitoribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Pp3c1_22820V3.1	Pp3c1_22820	Ribosomal L18p/L5e family protein	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000350	generation of catalytic spliceosome for second transesterification step	IEP	HCCA
MF	GO:0003697	single-stranded DNA binding	IEP	HCCA
BP	GO:0006352	DNA-templated transcription initiation	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
CC	GO:0016272	prefoldin complex	IEP	HCCA
BP	GO:0022607	cellular component assembly	IEP	HCCA
BP	GO:0022618	ribonucleoprotein complex assembly	IEP	HCCA
BP	GO:0032774	RNA biosynthetic process	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
BP	GO:0071826	ribonucleoprotein complex subunit organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005484	Ribosomal_L18	65	181

External Links

No external refs found!

Zm00001e002321_P001 (Zm00001e002321)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation