Aliases : ATHAM3, HAM3, LOM3, Zm00001e002296
Description : transcription factor (GRAS)
Gene families : OG0002830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002830_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00228020 | ATHAM3, HAM3,... | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
AT2G45160 | ATHAM1, HAM1, LOM1 | GRAS family transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Adi_g106923 | No alias | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g17369 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene11870.t1 | ATHAM3, HAM3,... | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.08G011800.1 | HAM2, LOM2,... | GRAS-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g12093 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g19349 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g01644 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os10g40390.1 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
Len_g24209 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g02436 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03889 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03890 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g37422 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Pnu_g13262 | ATHAM3, HAM3, LOM3 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0012.g005674 | No alias | GRAS-type transcription factor & original description: CDS=1-2607 | 0.04 | OrthoFinder output from all 47 species | |
Smo56382 | PAT1 | RNA biosynthesis.transcriptional activation.GRAS... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g090950.4.1 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
Solyc08g078800.1.1 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e007302_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e023181_P003 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e036709_P001 | ATHAM3, HAM3,... | transcription factor (GRAS) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEP | HCCA |
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0006694 | steroid biosynthetic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008202 | steroid metabolic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005202 | TF_GRAS | 282 | 644 |
No external refs found! |