1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e002215_P001

Zm00001e002215_P001 (NGA3, Zm00001e002215)


Aliases : NGA3, Zm00001e002215

Description : transcription factor (RAV/NGATHA)


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002215_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00142630 NGA1,... RNA biosynthesis.transcriptional activation.B3... 0.01 OrthoFinder output from all 47 species
AT3G61970 NGA2 AP2/B3-like transcriptional factor family protein 0.08 OrthoFinder output from all 47 species
Aspi01Gene28731.t1 TEM1, EDF1,... AP2-RAV-type transcription factor *(EDF) & original... 0.01 OrthoFinder output from all 47 species
Azfi_s0068.g036380 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Cba_g71540 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01027463001 NGA1 RNA biosynthesis.transcriptional activation.B3... 0.04 OrthoFinder output from all 47 species
Solyc10g083210.2.1 Solyc10g083210 transcription factor (RAV/NGATHA) 0.02 OrthoFinder output from all 47 species
Tin_g30531 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e041372_P001 NGA1, Zm00001e041372 transcription factor (RAV/NGATHA) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 30 145
No external refs found!