1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e002002_P001

Zm00001e002002_P001 (AFP3, Zm00001e002002)


Aliases : AFP3, Zm00001e002002

Description : transcriptional co-repressor (AFP/NINJA)


Gene families : OG0001010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001010_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e002002_P001

Target Alias Description ECC score Gene Family Method Actions
AT3G29575 AFP3 ABI five binding protein 3 0.04 OrthoFinder output from all 47 species
Aev_g07969 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13840 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50852 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Cba_g34419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27786 NINJA not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09497 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.02 OrthoFinder output from all 47 species
Dde_g28581 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_28869 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g30570.1 AFP2, LOC_Os03g30570 transcriptional co-repressor (AFP/NINJA) 0.07 OrthoFinder output from all 47 species
Len_g16879 AFP3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g28105 NINJA not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42875 AFP3 transcriptional co-repressor *(AFP/NINJA) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g03969 NINJA transcriptional co-repressor *(AFP/NINJA) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025253 NINJA not classified & original description: CDS=22-2187 0.02 OrthoFinder output from all 47 species
Zm00001e035495_P001 AFP3, Zm00001e035495 transcriptional co-repressor (AFP/NINJA) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032310 NINJA_B 78 139
IPR012463 Ninja_motif 27 60
IPR032308 TDBD 218 284
No external refs found!