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  5. Zm00001e001678_P001

Zm00001e001678_P001 (ATINO80, INO80, Zm00001e001678)


Aliases : ATINO80, INO80, Zm00001e001678

Description : ATPase component Ino80 of chromatin remodelling complex


Gene families : OG0003922 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001678_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00190690 ATINO80, INO80,... Chromatin organisation.chromatin remodeling... 0.06 OrthoFinder output from all 47 species
Adi_g005520 ATINO80, INO80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g107416 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.02 OrthoFinder output from all 47 species
Ala_g22698 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.11 OrthoFinder output from all 47 species
Als_g16557 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.06 OrthoFinder output from all 47 species
Als_g16558 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.04 OrthoFinder output from all 47 species
Aob_g12486 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.05 OrthoFinder output from all 47 species
Aop_g19078 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.08 OrthoFinder output from all 47 species
Aspi01Gene61035.t1 ATINO80, INO80,... ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Ceric.02G047900.1 ATINO80, INO80,... ATPase component *(Ino80) of chromatin remodelling... 0.11 OrthoFinder output from all 47 species
Dcu_g11743 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.13 OrthoFinder output from all 47 species
Dde_g25805 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.04 OrthoFinder output from all 47 species
Ehy_g12559 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.06 OrthoFinder output from all 47 species
GSVIVT01033231001 ATINO80, INO80 Chromatin organisation.chromatin remodeling... 0.17 OrthoFinder output from all 47 species
Gb_04007 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.07 OrthoFinder output from all 47 species
LOC_Os03g22900.1 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.24 OrthoFinder output from all 47 species
Len_g14744 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Lfl_g05043 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.05 OrthoFinder output from all 47 species
MA_3312g0010 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.07 OrthoFinder output from all 47 species
Mp8g00130.1 ATINO80, INO80 ATPase component Ino80 of chromatin remodelling complex 0.12 OrthoFinder output from all 47 species
Msp_g14197 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species
Nbi_g02503 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.06 OrthoFinder output from all 47 species
Ore_g02728 ATINO80, INO80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16643 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.05 OrthoFinder output from all 47 species
Pir_g13631 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.06 OrthoFinder output from all 47 species
Ppi_g08475 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0148.g023246 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.12 OrthoFinder output from all 47 species
Sam_g11608 No alias ATPase component *(Ino80) of chromatin remodelling... 0.02 OrthoFinder output from all 47 species
Smo444050 ATINO80, INO80 Chromatin organisation.chromatin remodeling... 0.11 OrthoFinder output from all 47 species
Solyc04g016370.3.1 ATINO80, INO80,... ATPase component Ino80 of chromatin remodelling complex 0.17 OrthoFinder output from all 47 species
Spa_g41400 ATINO80, INO80 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57104 ATINO80, INO80 ATPase component *(Ino80) of chromatin remodelling... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 1184 1294
IPR000330 SNF2_N 579 865
IPR020838 DBINO 339 467
No external refs found!