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  5. Zm00001e001672_P001

Zm00001e001672_P001 (AtTLP3, TLP3, Zm00001e001672)


Aliases : AtTLP3, TLP3, Zm00001e001672

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001672_P001

Target Alias Description ECC score Gene Family Method Actions
AT1G25280 TLP10, AtTLP10 tubby like protein 10 0.03 OrthoFinder output from all 47 species
AT1G76900 AtTLP1, TLP1 tubby like protein 1 0.02 OrthoFinder output from all 47 species
AT2G47900 AtTLP3, TLP3 tubby like protein 3 0.02 OrthoFinder output from all 47 species
Adi_g003799 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g076987 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g104657 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07274 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15705 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37612 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17487 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01271 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16858 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g78284 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G015500.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g06248 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12682 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24072 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24654 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009728001 TLP6, AtTLP6 RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
GSVIVT01010999001 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
GSVIVT01014191001 No alias RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Gb_06851 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g22800.1 AtTLP3, TLP3,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
LOC_Os08g01290.5 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Len_g17746 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03852 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25370 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15089 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04550 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003029 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=1-1392 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021211 AtTLP3, TLP3 TUB-type transcription factor & original description: CDS=126-977 0.03 OrthoFinder output from all 47 species
Sam_g14642 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19118 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50956 No alias TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo85745 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.03 OrthoFinder output from all 47 species
Solyc01g104670.3.1 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Solyc02g085130.4.1 TLP2, AtTLP2,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Solyc10g046970.2.1 TLP10, AtTLP10,... transcription factor (TUB) 0.04 OrthoFinder output from all 47 species
Spa_g55100 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 113 396
IPR001810 F-box_dom 49 93
No external refs found!