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  5. Zm00001e001473_P001

Zm00001e001473_P001 (Zm00001e001473)


Aliases : Zm00001e001473

Description : SOQ1 non-photochemical quenching regulator protein


Gene families : OG0003626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003626_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001473_P001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT1G56500 No alias haloacid dehalogenase-like hydrolase family protein 0.06 OrthoFinder output from all 47 species
Adi_g021878 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Ala_g09026 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Aspi01Gene46305.t1 Aspi01Gene46305 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46306.t1 Aspi01Gene46306 regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Ceric.02G025300.1 Ceric.02G025300 regulatory protein *(SOQ1) of non-photochemical... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001339.10 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Dac_g07066 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Dcu_g46221 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Ehy_g18146 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
GSVIVT01031253001 No alias Photosynthesis.photophosphorylation.photosystem... 0.08 OrthoFinder output from all 47 species
Gb_14671 No alias SOQ1 non-photochemical quenching regulator protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g19760.1 LOC_Os03g19760 SOQ1 non-photochemical quenching regulator protein 0.11 OrthoFinder output from all 47 species
Len_g47037 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Lfl_g10265 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
MA_287596g0010 No alias Protein SUPPRESSOR OF QUENCHING 1, chloroplastic... 0.03 OrthoFinder output from all 47 species
Mp5g22510.1 No alias SOQ1 non-photochemical quenching regulator protein 0.04 OrthoFinder output from all 47 species
Msp_g13160 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Nbi_g39429 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Ore_g09927 No alias regulatory protein *(SOQ1) of non-photochemical... 0.04 OrthoFinder output from all 47 species
Pir_g20017 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Pnu_g14012 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Ppi_g08248 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species
Sam_g50621 No alias regulatory protein *(SOQ1) of non-photochemical... 0.02 OrthoFinder output from all 47 species
Smo79954 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Solyc01g100650.3.1 Solyc01g100650 SOQ1 non-photochemical quenching regulator protein 0.08 OrthoFinder output from all 47 species
Spa_g16040 No alias regulatory protein *(SOQ1) of non-photochemical... 0.03 OrthoFinder output from all 47 species
Tin_g46320 No alias regulatory protein *(SOQ1) of non-photochemical... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001258 NHL_repeat 650 675
IPR001258 NHL_repeat 830 856
IPR041492 HAD_2 80 263
IPR012336 Thioredoxin-like_fold 448 543
No external refs found!