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  5. Zm00001e001454_P001

Zm00001e001454_P001 (Zm00001e001454)


Aliases : Zm00001e001454

Description : DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica (sp|q10mh8|rh24_orysj : 1101.0)


Gene families : OG0005452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001454_P001
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
Aev_g04135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G028100.1 Ceric.20G028100 not classified & original description: pacid=50566612... 0.09 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020903.17 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Cre12.g522850 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Dcu_g13893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g01689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028137001 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana 0.1 OrthoFinder output from all 47 species
LOC_Os03g19530.1 LOC_Os03g19530 DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
Len_g35470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_50249g0010 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Mp4g12240.1 No alias DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Pir_g19215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19373 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g079330.3.1 Solyc01g079330 DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 463 559
IPR011545 DEAD/DEAH_box_helicase_dom 243 413
No external refs found!