LOC_Os03g20430 (Os03g0320400)


Aliases : Os03g0320400

Description : 27.3.69 RNA.regulation of transcription.SET-domain transcriptional regulator family Encodes a SU(VAR)3-9 homolog, a SET domain protein. Known SET domain proteins are involved in epigenetic control of gene expression and act as histone methyltransferases. There are 10 SUVH genes in Arabidopsis and members of this subfamily of the SET proteins have an additional conserved SRA domain. SU(VAR)3-9 homolog 3 (SUVH3)


Gene families : OG_01_0000166 (Gene family) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g20430
Cluster HCCA cluster: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g45130 Os08g0565700 27.3.69 RNA.regulation of transcription.SET-domain... 0.01 Gene family
Zm00001d032343 GRMZM2G074094 No description available 0.05 Gene family

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan
MF GO:0008270 zinc ion binding IEA InterProScan
MF GO:0018024 histone-lysine N-methyltransferase activity IEA InterProScan
BP GO:0034968 histone lysine methylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003105 SRA_YDG 171 319
IPR007728 Pre-SET_dom 347 445
No external refs found!