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  5. Zm00001e001269_P001

Zm00001e001269_P001 (Zm00001e001269)


Aliases : Zm00001e001269

Description : subfamily ABCG transporter


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001269_P001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00063p00178530 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AMTR_s00075p00150250 evm_27.TU.AmTr_v1... ABC transporter G family member 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.09 OrthoFinder output from all 47 species
AT2G13610 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT2G37360 No alias ABC-2 type transporter family protein 0.11 OrthoFinder output from all 47 species
AT3G53510 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55110 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55130 WBC19, ATWBC19 white-brown complex homolog 19 0.03 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.05 OrthoFinder output from all 47 species
AT5G13580 No alias ABC-2 type transporter family protein 0.08 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.16 OrthoFinder output from all 47 species
Adi_g113805 No alias subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05499.t1 Aspi01Gene05499 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0120.g046757 No alias subfamily ABCG transporter & original description: CDS=1-2250 0.06 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07276 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17500 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g08003 No alias subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23513 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.16 OrthoFinder output from all 47 species
GSVIVT01022346001 No alias ABC transporter G family member 5 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01025582001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01032625001 No alias Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.15 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.07 OrthoFinder output from all 47 species
LOC_Os01g42900.1 LOC_Os01g42900 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.22 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os05g31910.2 LOC_Os05g31910 subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
LOC_Os06g30730.1 LOC_Os06g30730 subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39649 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
MA_10426701g0030 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
MA_529254g0010 No alias no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Mp3g16700.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g04860.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g23417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11905 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13207 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g37386 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g22707 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61308 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c9_18880V3.1 Pp3c9_18880 ABC-2 type transporter family protein 0.01 OrthoFinder output from all 47 species
Ppi_g31857 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006110 No alias subfamily ABCG transporter & original description: CDS=1-2232 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023718 No alias not classified & original description: CDS=1-2514 0.06 OrthoFinder output from all 47 species
Smo88976 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Solyc03g007690.1.1 Solyc03g007690 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.16 OrthoFinder output from all 47 species
Solyc04g010200.1.1 Solyc04g010200 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc07g062630.1.1 Solyc07g062630 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Spa_g10980 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29782 No alias subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g41222 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11561 No alias subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40276 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44760 No alias subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e020697_P001 Zm00001e020697 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 212 364
IPR013525 ABC_2_trans 538 745
No external refs found!