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  5. Zm00001e001220_P001

Zm00001e001220_P001 (XBAT31, Zm00001e001220)


Aliases : XBAT31, Zm00001e001220

Description : RING-HC-class E3 ligase


Gene families : OG0000851 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000851_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001220_P001

Target Alias Description ECC score Gene Family Method Actions
Len_g16343 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g11065 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g08640 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0270.g027011 XBAT31 E3 ubiquitin ligase *(XBAT3) & original description: CDS=728-2197 0.02 OrthoFinder output from all 47 species
Zm00001e027635_P001 XBAT31, Zm00001e027635 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e029646_P004 XBAT31, Zm00001e029646 RING-HC-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR020683 DUF3447 18 110
IPR020683 DUF3447 113 184
IPR020683 DUF3447 197 250
No external refs found!