Zm00001e001173_P001 (Zm00001e001173)


Aliases : Zm00001e001173

Description : transcription factor (LIM)


Gene families : OG0000440 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000440_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001173_P001

Target Alias Description ECC score Gene Family Method Actions
AT2G39900 No alias GATA type zinc finger transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT3G61230 No alias GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Adi_g050018 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g077333 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097642 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106595 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32263 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07996 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21872 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31424 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10082 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g65927 No alias LIM-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.11G018100.1 WLIM1, Ceric.11G018100 LIM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.12G046700.1 WLIM1, Ceric.12G046700 LIM-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g03324 No alias LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03375 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21255 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25400 WLIM1 LIM-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06617 WLIM1 LIM-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c11_18380V3.1 Pp3c11_18380 GATA type zinc finger transcription factor family protein 0.02 OrthoFinder output from all 47 species
Sam_g15172 No alias LIM-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Smo143123 WLIM1 RNA biosynthesis.transcriptional activation.LIM... 0.03 OrthoFinder output from all 47 species
Solyc05g052780.4.1 Solyc05g052780 transcription factor (LIM) 0.03 OrthoFinder output from all 47 species
Spa_g22855 WLIM1 LIM-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 9 64
IPR001781 Znf_LIM 110 165
No external refs found!