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  5. Zm00001e001167_P003

Zm00001e001167_P003 (COI1, Zm00001e001167)


Aliases : COI1, Zm00001e001167

Description : component COI of jasmonic acid receptor complex


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001167_P003
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G26810 AFB2 auxin signaling F-box 2 0.06 OrthoFinder output from all 47 species
Aev_g04857 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Aop_g10981 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Dac_g07329 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Dac_g16295 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Dcu_g04971 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g08197 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g13244 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ehy_g02828 COI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021910001 TIR1 Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Lfl_g15646 COI1 component *(COI) of jasmonic acid receptor complex &... 0.02 OrthoFinder output from all 47 species
MA_10428988g0010 COI1 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species
Msp_g08656 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Ore_g16353 COI1 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g29827 TIR1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g15041 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e028730_P001 COI1, Zm00001e028730 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
InterPro domains Description Start Stop
IPR041567 COI1_F-box 19 58
IPR041101 Transp_inhibit 77 123
No external refs found!