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Aliases : SBP1, Zm00001e001146
Description : Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana (sp|q9ldd1|brg3_arath : 115.0)
Gene families : OG0000315 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000315_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e001146_P001 | |
| Cluster | HCCA: Cluster_137 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G45976 | SBP1 | S-ribonuclease binding protein 1 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g039739 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g057968 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g08224 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g19169 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0329.g065317 | RING | not classified & original description: CDS=1-1395 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08650 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g18320 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G006900.1 | Ceric.27G006900 | not classified & original description: pacid=50605978... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g09533 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g00571 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g07549 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01009476001 | SBP1 | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020407001 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20174 | SBP1 | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_38209 | SBP1 | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g34020.1 | RING, LOC_Os11g34020 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g40621 | SBP1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09037 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g39519 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g41877 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g02388 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g06360 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g13958 | SBP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo103907 | No alias | Probable BOI-related E3 ubiquitin-protein ligase 3... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g00686 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g34647 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e013554_P001 | Zm00001e013554 | Probable BOI-related E3 ubiquitin-protein ligase 2... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e024196_P001 | RING, Zm00001e024196 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006575 | cellular modified amino acid metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| BP | GO:0030328 | prenylcysteine catabolic process | IEP | HCCA |
| BP | GO:0030329 | prenylcysteine metabolic process | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| BP | GO:0042219 | cellular modified amino acid catabolic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901565 | organonitrogen compound catabolic process | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |