AMTR_s00056p00189660 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.174

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG_01_0001223 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001223_tree ,
OG_02_0001557 (LandPlants) Phylogenetic Tree(s): OG_02_0001557_tree ,
OG_03_0001828 (SeedPlants) Phylogenetic Tree(s): OG_03_0001828_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00189660
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282200 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
Pp3c8_3630V3.1 No alias SNF7 family protein 0.03 Archaeplastida
LOC_Os09g09480.2 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 LandPlants
Pp3c8_3630V3.1 No alias SNF7 family protein 0.03 LandPlants
Zm00001e027871_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 LandPlants
GSVIVT01016913001 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 SeedPlants
LOC_Os09g09480.2 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 SeedPlants
Zm00001e027871_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 115
No external refs found!