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  5. Zm00001e001033_P002

Zm00001e001033_P002 (Zm00001e001033)


Aliases : Zm00001e001033

Description : plant-specific stabilizing component ClpT of chloroplast Clp-type protease complex


Gene families : OG0007488 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e001033_P002
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00213590 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
AT4G12060 No alias Double Clp-N motif protein 0.14 OrthoFinder output from all 47 species
Adi_g100657 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Ala_g22471 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Aob_g02846 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Aop_g19961 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species
Aspi01Gene18165.t1 Aspi01Gene18165 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0072.g037001 No alias plant-specific stabilizing component *(ClpT) of... 0.06 OrthoFinder output from all 47 species
Dcu_g32107 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Ehy_g10685 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
GSVIVT01018510001 No alias Protein degradation.peptidase families.serine-type... 0.09 OrthoFinder output from all 47 species
LOC_Os03g14280.1 LOC_Os03g14280 plant-specific stabilizing component ClpT of chloroplast... 0.12 OrthoFinder output from all 47 species
Len_g10201 No alias plant-specific stabilizing component *(ClpT) of... 0.05 OrthoFinder output from all 47 species
MA_12551g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
MA_377212g0010 No alias plant-specific stabilizing component ClpT of chloroplast... 0.02 OrthoFinder output from all 47 species
Mp6g19150.1 No alias plant-specific stabilizing component ClpT of chloroplast... 0.11 OrthoFinder output from all 47 species
Nbi_g08875 No alias plant-specific stabilizing component *(ClpT) of... 0.04 OrthoFinder output from all 47 species
Ore_g15428 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Ppi_g32744 No alias plant-specific stabilizing component *(ClpT) of... 0.02 OrthoFinder output from all 47 species
Solyc03g007110.3.1 Solyc03g007110 plant-specific stabilizing component ClpT of chloroplast... 0.12 OrthoFinder output from all 47 species
Solyc08g079660.3.1 Solyc08g079660 plant-specific stabilizing component ClpT of chloroplast... 0.09 OrthoFinder output from all 47 species
Spa_g04464 No alias plant-specific stabilizing component *(ClpT) of... 0.05 OrthoFinder output from all 47 species
Tin_g10438 No alias plant-specific stabilizing component *(ClpT) of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051920 peroxiredoxin activity IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR004176 Clp_R_dom 93 145
IPR004176 Clp_R_dom 180 210
No external refs found!