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  5. Zm00001e000935_P001

Zm00001e000935_P001 (Zm00001e000935)


Aliases : Zm00001e000935

Description : transcription factor (bHLH). bHLH-IVa-class iron homeostasis regulator


Gene families : OG0001148 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001148_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000935_P001
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT2G22750 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G37850 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Ala_g27615 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04159 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09650 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g12323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003697001 NAI1 RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
GSVIVT01004409001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
GSVIVT01006588001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Gb_19402 EGL1, EGL3, ATMYC-2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os03g12760.1 LOC_Os03g12760 transcription factor (bHLH). bHLH-IVa-class iron... 0.05 OrthoFinder output from all 47 species
LOC_Os03g46860.1 LOC_Os03g46860 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os03g51580.1 LOC_Os03g51580 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
LOC_Os12g43620.1 LOC_Os12g43620 transcription factor (bHLH). bHLH-IVa-class iron... 0.03 OrthoFinder output from all 47 species
Len_g32880 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03516 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15155 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31815 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g106460.4.1 Solyc01g106460 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Solyc05g009640.4.1 Solyc05g009640 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc06g064580.2.1 Solyc06g064580 transcription factor (bHLH). bHLH-IVa-class iron... 0.02 OrthoFinder output from all 47 species
Solyc06g064590.3.1 Solyc06g064590 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species
Zm00001e003314_P001 Zm00001e003314 transcription factor (bHLH). bHLH-IVa-class iron... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 148 195
No external refs found!