Zm00001e000850_P001 (SVR7, Zm00001e000850)


Aliases : SVR7, Zm00001e000850

Description : Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays (sp|b4f8z1|atp4_maize : 1196.0)


Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000850_P001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00074820 SVR7,... Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00067630 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00067730 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G16390 SVR7 pentatricopeptide (PPR) repeat-containing protein 0.07 OrthoFinder output from all 47 species
AT5G46580 No alias pentatricopeptide (PPR) repeat-containing protein 0.07 OrthoFinder output from all 47 species
Adi_g059010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g07311 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08499 EMB2750 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene39761.t1 Aspi01Gene39761 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.15G014300.1 Ceric.15G014300 not classified & original description: pacid=50639905... 0.03 OrthoFinder output from all 47 species
Dcu_g14136 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g17091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07226 SVR7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01446 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003493001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.06 OrthoFinder output from all 47 species
GSVIVT01003496001 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.01 OrthoFinder output from all 47 species
Gb_17291 SVR7 Pentatricopeptide repeat-containing protein At4g16390,... 0.03 OrthoFinder output from all 47 species
Gb_19282 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
LOC_Os03g11670.1 SVR7, LOC_Os03g11670 Pentatricopeptide repeat-containing protein ATP4... 0.11 OrthoFinder output from all 47 species
Len_g02383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_283144g0010 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Mp1g08510.1 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.02 OrthoFinder output from all 47 species
Msp_g09352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01171 SVR7 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g12890 SVR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06411 SVR7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo442013 No alias Pentatricopeptide repeat-containing protein At5g46580,... 0.04 OrthoFinder output from all 47 species
Solyc08g077140.1.1 Solyc08g077140 Pentatricopeptide repeat-containing protein At5g46580,... 0.03 OrthoFinder output from all 47 species
Solyc11g012670.1.1 SVR7, Solyc11g012670 Pentatricopeptide repeat-containing protein At4g16390,... 0.11 OrthoFinder output from all 47 species
Spa_g04939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 236 259
IPR033443 PPR_long 356 509
IPR002885 Pentatricopeptide_repeat 163 207
IPR002885 Pentatricopeptide_repeat 269 314
No external refs found!