Aliases : SVR7, Zm00001e000850
Description : Pentatricopeptide repeat-containing protein ATP4, chloroplastic OS=Zea mays (sp|b4f8z1|atp4_maize : 1196.0)
Gene families : OG0004930 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004930_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e000850_P001 | |
Cluster | HCCA: Cluster_114 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00047p00074820 | SVR7,... | Pentatricopeptide repeat-containing protein At4g16390,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00149p00067630 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00149p00067730 | evm_27.TU.AmTr_v1... | No description available | 0.03 | OrthoFinder output from all 47 species | |
AT4G16390 | SVR7 | pentatricopeptide (PPR) repeat-containing protein | 0.07 | OrthoFinder output from all 47 species | |
AT5G46580 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.07 | OrthoFinder output from all 47 species | |
Adi_g059010 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g01055 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aob_g07311 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g08499 | EMB2750 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene39761.t1 | Aspi01Gene39761 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.15G014300.1 | Ceric.15G014300 | not classified & original description: pacid=50639905... | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g14136 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g17091 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g07226 | SVR7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g01446 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01003493001 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01003496001 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.01 | OrthoFinder output from all 47 species | |
Gb_17291 | SVR7 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_19282 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os03g11670.1 | SVR7, LOC_Os03g11670 | Pentatricopeptide repeat-containing protein ATP4... | 0.11 | OrthoFinder output from all 47 species | |
Len_g02383 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_283144g0010 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.04 | OrthoFinder output from all 47 species | |
Mp1g08510.1 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.02 | OrthoFinder output from all 47 species | |
Msp_g09352 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g01171 | SVR7 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Ore_g12890 | SVR7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g06411 | SVR7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sam_g11215 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Smo442013 | No alias | Pentatricopeptide repeat-containing protein At5g46580,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g077140.1.1 | Solyc08g077140 | Pentatricopeptide repeat-containing protein At5g46580,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc11g012670.1.1 | SVR7, Solyc11g012670 | Pentatricopeptide repeat-containing protein At4g16390,... | 0.11 | OrthoFinder output from all 47 species | |
Spa_g04939 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016671 | oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0033743 | peptide-methionine (R)-S-oxide reductase activity | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
No external refs found! |