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Aliases : Zm00001e000820
Description : Protein UPSTREAM OF FLC OS=Arabidopsis thaliana (sp|q9lx14|ufc_arath : 137.0)
Gene families : OG0001011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001011_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e000820_P002 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00068p00133150 | evm_27.TU.AmTr_v1... | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| AT3G46110 | No alias | Domain of unknown function (DUF966) | 0.04 | OrthoFinder output from all 47 species | |
| AT5G59790 | No alias | Domain of unknown function (DUF966) | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g106265 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37634 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g08526 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g15972 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g51132 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g12604 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene18845.t1 | Aspi01Gene18845 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene34495.t1 | Aspi01Gene34495 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58852.t1 | Aspi01Gene58852 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0116.g046319 | No alias | not classified & original description: CDS=53-2212 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14488 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.03G030000.1 | Ceric.03G030000 | not classified & original description: pacid=50571333... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.10G058400.1 | Ceric.10G058400 | not classified & original description: pacid=50611779... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G059700.1 | Ceric.14G059700 | not classified & original description: pacid=50633215... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.23G080300.1 | Ceric.23G080300 | not classified & original description: pacid=50610288... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16699 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g49111 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01031468001 | No alias | No description available | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031469001 | No alias | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35177 | No alias | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g62200.1 | LOC_Os01g62200 | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g09200.1 | LOC_Os03g09200 | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os03g48600.1 | LOC_Os03g48600 | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g39750.1 | LOC_Os09g39750 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g18739 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10435302g0010 | No alias | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g04028 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g60880 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0178.g024671 | No alias | not classified & original description: CDS=409-2136 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0192.g025363 | No alias | not classified & original description: CDS=123-2075 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g48272 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g50494 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo412562 | No alias | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g054800.3.1 | Solyc04g054800 | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g09824 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e027133_P001 | Zm00001e027133 | Protein UPSTREAM OF FLC OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| CC | GO:0018995 | host cellular component | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| CC | GO:0033643 | host cell part | IEP | HCCA |
| CC | GO:0033646 | host intracellular part | IEP | HCCA |
| CC | GO:0033647 | host intracellular organelle | IEP | HCCA |
| CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| CC | GO:0042025 | host cell nucleus | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| No external refs found! |