LOC_Os03g19650 (Os03g0309800)


Aliases : Os03g0309800

Description : 33.99 development.unspecified embryo defective 2750 (EMB2750)


Gene families : OG_01_0001691 (Gene family) Phylogenetic Tree(s): OG0001691_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g19650
Cluster HCCA cluster: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT3G06430 EMB2750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Gene family
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 Gene family
AT5G48730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 Gene family
GSVIVT01017677001 No alias 33.99 development.unspecified embryo defective 2750 (EMB2750) 0.06 Gene family
GSVIVT01028689001 No alias No description available 0.02 Gene family
MA_10431478g0010 No alias No description available 0.03 Gene family
MA_793801g0010 No alias 33.99 development.unspecified embryo defective 2750 (EMB2750) 0.03 Gene family
Solyc01g006500.3.1 Solyc01g006500.3 No description available 0.02 Gene family
Solyc08g045780.3.1 Solyc08g045780.3 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... 0.03 Gene family
Zm00001d018693 GRMZM2G341621 33.99 development.unspecified embryo defective 2750 (EMB2750) 0.05 Gene family
Zm00001d037476 GRMZM2G071162 No description available 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 229
IPR002885 Pentatricopeptide_repeat 359 404
IPR002885 Pentatricopeptide_repeat 420 474
IPR002885 Pentatricopeptide_repeat 242 302
IPR002885 Pentatricopeptide_repeat 154 178
IPR002885 Pentatricopeptide_repeat 326 352
No external refs found!