LOC_Os03g19610 (Os03g0309400)


Aliases : Os03g0309400

Description : 10.8.1 cell wall.pectin*esterases.PME Pectin lyase-like superfamily protein


Gene families : OG_01_0009802 (Gene family) Phylogenetic Tree(s): OG0009802_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g19610
Cluster HCCA cluster: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT3G17060 No alias Pectin lyase-like superfamily protein 0.11 Gene family
GSVIVT01034985001 No alias 10.8.1 cell wall.pectin*esterases.PME Pectin lyase-like... 0.09 Gene family
Solyc12g099230.2.1 Solyc12g099230.2 10.8.1 cell wall.pectin*esterases.PME Pectin lyase-like... 0.02 Gene family
Zm00001d044585 GRMZM2G004927 10.8.1 cell wall.pectin*esterases.PME Pectin lyase-like... 0.17 Gene family

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan
BP GO:0042545 cell wall modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 59 336
No external refs found!