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  5. Zm00001e000643_P001

Zm00001e000643_P001 (Zm00001e000643)


Aliases : Zm00001e000643

Description : Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana (sp|q8l557|em514_arath : 141.0)


Gene families : OG0001145 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000643_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00189420 evm_27.TU.AmTr_v1... Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G62440 No alias Protein of unknown function (DUF3223) 0.07 OrthoFinder output from all 47 species
Adi_g008133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36464 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0205.g057729 No alias not classified & original description: CDS=55-822 0.03 OrthoFinder output from all 47 species
Ceric.04G044700.1 Ceric.04G044700 not classified & original description: pacid=50632335... 0.05 OrthoFinder output from all 47 species
Ceric.24G080300.1 Ceric.24G080300 not classified & original description: pacid=50628596... 0.04 OrthoFinder output from all 47 species
Dcu_g02845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g20747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g08810.1 LOC_Os03g08810 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g19534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_77759g0010 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp1g29710.1 No alias Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g13022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g41044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g09324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022649 No alias not classified & original description: CDS=11-1570 0.02 OrthoFinder output from all 47 species
Smo404272 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc03g116020.3.1 Solyc03g116020 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc04g078850.4.1 Solyc04g078850 Protein DCL, chloroplastic OS=Solanum lycopersicum... 0.02 OrthoFinder output from all 47 species
Solyc06g069770.3.1 Solyc06g069770 Protein EMBRYO DEFECTIVE 514 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002098 tRNA wobble uridine modification IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003922 GMP synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006177 GMP biosynthetic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009123 nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP HCCA
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP HCCA
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0033588 elongator holoenzyme complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046037 GMP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!