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  5. Zm00001e000639_P002

Zm00001e000639_P002 (VPS37-1, Zm00001e000639)


Aliases : VPS37-1, Zm00001e000639

Description : component VPS37 of ESCRT-I complex


Gene families : OG0002321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000639_P002
Cluster HCCA: Cluster_101

Target Alias Description ECC score Gene Family Method Actions
AT3G53120 VPS37-1 Modifier of rudimentary (Mod(r)) protein 0.03 OrthoFinder output from all 47 species
Azfi_s0007.g010591 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g15163 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.30G032100.1 VPS37-1, Ceric.30G032100 component *(VPS37) of ESCRT-I complex & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020675.80 VPS37-1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 OrthoFinder output from all 47 species
Cre08.g362550 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 OrthoFinder output from all 47 species
Dde_g34374 VPS37-1 component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Gb_34651 No alias component VPS37 of ESCRT-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os03g08770.1 VPS37-1, LOC_Os03g08770 component VPS37 of ESCRT-I complex 0.03 OrthoFinder output from all 47 species
Ore_g02614 No alias component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Ppi_g59658 No alias component *(VPS37) of ESCRT-I complex & original... 0.02 OrthoFinder output from all 47 species
Solyc10g083780.1.1 VPS37-1, Solyc10g083780 component VPS37 of ESCRT-I complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR009851 Mod_r 79 221
No external refs found!