LOC_Os03g19560 (Os03g0308800)


Aliases : Os03g0308800

Description : 27.1 RNA.processing It is a RNA tetratricopeptide repeat-containing protein required for normal processing of transcripts from the polycistronic chloroplast psbB-psbT-psbH-petB-petD operon coding for proteins of the photosystem II and cytochrome b6/f complexes. Localizes to the chloroplast membrane. Involved in regulating plastidial gene expression and biogenesis. high chlorophyll fluorescent 107 (HCF107)


Gene families : OG_01_0006115 (Gene family) Phylogenetic Tree(s): OG0006115_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g19560
Cluster HCCA cluster: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT3G17040 HCF107 high chlorophyll fluorescent 107 0.05 Gene family
Smo61985 PACid_15420136 27.1 RNA.processing It is a RNA tetratricopeptide... 0.02 Gene family
Zm00001d028901 GRMZM2G121960 27.1 RNA.processing It is a RNA tetratricopeptide... 0.07 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!