Zm00001e000618_P002 (PDS3, PDS, PDE226,...)


Aliases : PDS3, PDS, PDE226, Zm00001e000618

Description : phytoene desaturase (PDS)


Gene families : OG0006245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006245_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000618_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00131p00071060 PDS3, PDS,... Secondary metabolism.terpenoids.terpenoid... 0.03 OrthoFinder output from all 47 species
AT4G14210 PDS3, PDS, PDE226 phytoene desaturase 3 0.06 OrthoFinder output from all 47 species
Aev_g13760 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09707 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g01360 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene08410.t1 PDS3, PDS,... phytoene desaturase *(PDS) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0047.g030344 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: CDS=138-1889 0.05 OrthoFinder output from all 47 species
Cba_g36080 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G066500.1 PDS3, PDS,... phytoene desaturase *(PDS) & original description:... 0.06 OrthoFinder output from all 47 species
Cre12.g509650 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
GSVIVT01016650001 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.05 OrthoFinder output from all 47 species
LOC_Os03g08570.1 PDS3, PDS,... phytoene desaturase (PDS) 0.08 OrthoFinder output from all 47 species
Lfl_g01859 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.08 OrthoFinder output from all 47 species
Mp8g14330.1 PDS3, PDS, PDE226 phytoene desaturase (PDS) 0.03 OrthoFinder output from all 47 species
Msp_g26251 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10268 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17790 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.03 OrthoFinder output from all 47 species
Smo232430 PDS3, PDS, PDE226 Secondary metabolism.terpenoids.terpenoid... 0.04 OrthoFinder output from all 47 species
Tin_g02716 PDS3, PDS, PDE226 phytoene desaturase *(PDS) & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 106 547
No external refs found!