LOC_Os03g19340 (Os03g0306200, Os03g0306302)


Aliases : Os03g0306200, Os03g0306302

Description : 33.99 development.unspecified WD40/YVTN repeat-like-containing domainBromodomain


Gene families : OG_01_0005307 (Gene family) Phylogenetic Tree(s): OG0005307_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os03g19340
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT2G47410 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.02 Gene family
AT5G49430 No alias WD40/YVTN repeat-like-containing domain;Bromodomain 0.04 Gene family
Cpa|evm.model.tig00000808.30 No alias 33.99 development.unspecified WD40/YVTN... 0.02 Gene family
Cre02.g078150 No alias 33.99 development.unspecified WD40/YVTN... 0.03 Gene family
GSVIVT01028117001 No alias 33.99 development.unspecified WD40/YVTN... 0.05 Gene family
GSVIVT01035014001 No alias 33.99 development.unspecified WD40/YVTN... 0.06 Gene family
MA_10430074g0010 No alias 33.99 development.unspecified WD40/YVTN... 0.04 Gene family
MA_58934g0010 No alias 33.99 development.unspecified WD40/YVTN... 0.04 Gene family
Solyc01g060040.3.1 Solyc01g060040.3 33.99 development.unspecified WD40/YVTN... 0.11 Gene family
Zm00001d008654 GRMZM2G321420,... 33.99 development.unspecified WD40/YVTN... 0.11 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 298 327
IPR001680 WD40_repeat 198 233
IPR001680 WD40_repeat 168 191
IPR001680 WD40_repeat 510 549
IPR001487 Bromodomain 1555 1612
No external refs found!