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  5. Zm00001e000371_P001

Zm00001e000371_P001 (ATG3, ATATG3, Zm00001e000371)


Aliases : ATG3, ATATG3, Zm00001e000371

Description : ATG3 autophagosome ATG8-conjugation E2 protein


Gene families : OG0004602 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004602_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000371_P001
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AT5G61500 ATG3, ATATG3 autophagy 3 (APG3) 0.01 OrthoFinder output from all 47 species
Aev_g03034 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.02 OrthoFinder output from all 47 species
Als_g18442 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.03 OrthoFinder output from all 47 species
GSVIVT01018224001 ATG3, ATATG3 Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 OrthoFinder output from all 47 species
Gb_27675 ATG3, ATATG3 ATG3 autophagosome ATG8-conjugation E2 protein 0.03 OrthoFinder output from all 47 species
Gb_27676 ATG3, ATATG3 Autophagy-related protein 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g11974 ATG3, ATATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!