Zm00001e000344_P001 (Zm00001e000344)


Aliases : Zm00001e000344

Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 113.0)


Gene families : OG0000599 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000599_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000344_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00020480 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00148p00068590 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.08 OrthoFinder output from all 47 species
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.09 OrthoFinder output from all 47 species
AT2G22680 No alias Zinc finger (C3HC4-type RING finger) family protein 0.05 OrthoFinder output from all 47 species
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.02 OrthoFinder output from all 47 species
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.11 OrthoFinder output from all 47 species
Adi_g021972 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22775.t1 Aspi01Gene22775 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25613.t1 Aspi01Gene25613 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46085.t1 Aspi01Gene46085 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0064.g035638 No alias not classified & original description: CDS=1-2802 0.03 OrthoFinder output from all 47 species
Ceric.09G060200.1 Ceric.09G060200 not classified & original description: pacid=50588484... 0.06 OrthoFinder output from all 47 species
Ceric.24G014600.1 Ceric.24G014600 not classified & original description: pacid=50629291... 0.04 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.71 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Dcu_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38041 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g50945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009240001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01016259001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.08 OrthoFinder output from all 47 species
Gb_01603 No alias ubiquitin protein ligase (WAV3) 0.04 OrthoFinder output from all 47 species
Gb_07921 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_24701 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os03g04890.1 LOC_Os03g04890 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os04g01160.1 LOC_Os04g01160 ubiquitin protein ligase (WAV3) 0.04 OrthoFinder output from all 47 species
LOC_Os04g42980.1 LOC_Os04g42980 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os08g03270.1 LOC_Os08g03270 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
LOC_Os10g32740.1 LOC_Os10g32740 E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g32760.1 LOC_Os10g32760 Probable E3 ubiquitin-protein ligase WAVH2... 0.05 OrthoFinder output from all 47 species
LOC_Os12g24390.1 LOC_Os12g24390 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g24093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g05684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21332 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11225g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_129331g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_218345g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_2719537g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_7835328g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g15586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007353 No alias not classified & original description: CDS=1-2007 0.02 OrthoFinder output from all 47 species
Solyc02g091710.3.1 Solyc02g091710 ubiquitin protein ligase (WAV3) 0.02 OrthoFinder output from all 47 species
Spa_g14357 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g14647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38756 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10599 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e040514_P001 Zm00001e040514 ubiquitin protein ligase (WAV3) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 10 41
IPR002035 VWF_A 203 390
IPR032838 Vwaint_dom 575 717
No external refs found!