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  5. Zm00001e000256_P001

Zm00001e000256_P001 (OLI5, RPL5A, PGY3,...)


Aliases : OLI5, RPL5A, PGY3, ATL5, Zm00001e000256

Description : component RPL5 of LSU proteome component


Gene families : OG0002471 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000256_P001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00162800 OLI5, RPL5A,... Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
AT3G25520 OLI5, RPL5A, PGY3, ATL5 ribosomal protein L5 0.22 OrthoFinder output from all 47 species
AT5G39740 OLI7, RPL5B ribosomal protein L5 B 0.27 OrthoFinder output from all 47 species
Adi_g041241 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g073146 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aev_g23295 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aob_g06436 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g23151 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species
Azfi_s0136.g050950 OLI7, RPL5B not classified & original description: CDS=209-979 0.18 OrthoFinder output from all 47 species
Cba_g07470 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.07G020600.1 OLI7, RPL5B,... component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ceric.24G049300.1 OLI7, RPL5B,... component *(uL18) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Ceric.24G050100.1 OLI7, RPL5B,... component *(uL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000194.49 OLI7, RPL5B Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 OrthoFinder output from all 47 species
Cre14.g621450 OLI7, RPL5B Protein biosynthesis.cytosolic ribosome.large subunit... 0.1 OrthoFinder output from all 47 species
Dac_g27299 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Dcu_g01074 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Dcu_g34942 OLI5, RPL5A, PGY3, ATL5 component *(uL18) of large ribosomal-subunit (LSU)... 0.14 OrthoFinder output from all 47 species
Dde_g09355 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ehy_g08236 OLI5, RPL5A, PGY3, ATL5 component *(uL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01001906001 No alias 60S ribosomal protein L5 OS=Cucumis sativus 0.06 OrthoFinder output from all 47 species
GSVIVT01038188001 OLI7, RPL5B Protein biosynthesis.cytosolic ribosome.large subunit... 0.13 OrthoFinder output from all 47 species
Gb_16695 OLI7, RPL5B component RPL5 of LSU proteome component 0.07 OrthoFinder output from all 47 species
LOC_Os01g67134.1 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.23 OrthoFinder output from all 47 species
Len_g09553 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Lfl_g10267 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g21527 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
MA_70965g0010 OLI7, RPL5B component RPL5 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Mp4g15800.1 OLI7, RPL5B component RPL5 of LSU proteome component 0.17 OrthoFinder output from all 47 species
Msp_g02730 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Nbi_g20406 OLI5, RPL5A, PGY3, ATL5 component *(uL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Pir_g01232 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pp3c1_7160V3.1 OLI7, RPL5B, Pp3c1_7160 ribosomal protein L5 B 0.04 OrthoFinder output from all 47 species
Pp3c7_25660V3.1 OLI7, RPL5B, Pp3c7_25660 ribosomal protein L5 B 0.09 OrthoFinder output from all 47 species
Ppi_g10597 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Ppi_g16089 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Ppi_g46936 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006742 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g10501 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g12335 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.1 OrthoFinder output from all 47 species
Sam_g20151 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.11 OrthoFinder output from all 47 species
Sam_g20152 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Sam_g29764 No alias component *(uL18) of large ribosomal-subunit (LSU)... 0.17 OrthoFinder output from all 47 species
Smo144921 OLI5, RPL5A, PGY3, ATL5 Protein biosynthesis.cytosolic ribosome.large subunit... 0.08 OrthoFinder output from all 47 species
Solyc06g007670.4.1 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.21 OrthoFinder output from all 47 species
Solyc06g082870.4.1 OLI5, RPL5A,... component RPL5 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Solyc09g020130.3.1 OLI7, RPL5B,... component RPL5 of LSU proteome component 0.12 OrthoFinder output from all 47 species
Spa_g05892 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.19 OrthoFinder output from all 47 species
Spa_g15116 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Spa_g38167 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.12 OrthoFinder output from all 47 species
Spa_g43318 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Spa_g53510 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.18 OrthoFinder output from all 47 species
Tin_g01672 OLI7, RPL5B component *(uL18) of large ribosomal-subunit (LSU)... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
MF GO:0008097 5S rRNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005485 Rbsml_L5_euk/L18_arc 15 176
IPR025607 Rbsml_L5e_C 192 282
No external refs found!