Zm00001e000173_P003 (KNAT7, IXR11, Zm00001e000173)

Aliases : KNAT7, IXR11, Zm00001e000173

Description : transcription factor (KNOX)

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e000173_P003
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00026p00162850	KNAT3,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
AT1G23380	KNAT6, KNAT6L, KNAT6S	KNOTTED1-like homeobox gene 6	0.03	OrthoFinder output from all 47 species
AT5G11060	KNAT4	KNOTTED1-like homeobox gene 4	0.02	OrthoFinder output from all 47 species
AT5G25220	KNAT3	KNOTTED1-like homeobox gene 3	0.05	OrthoFinder output from all 47 species
Aev_g16413	KNAT4	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g51107	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0006.g009595	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1050	0.02	OrthoFinder output from all 47 species
Azfi_s0574.g078063	KNAT3	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G031700.1	KNAT3, Ceric.10G031700	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.13G020400.1	KNAT3, Ceric.13G020400	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ehy_g07584	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07800	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g12162	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g30696	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009273001	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01035921001	KNAT3	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_10887	BP, BP1, KNAT1	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os02g08544.1	KNAT3, LOC_Os02g08544	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os03g03164.2	KNAT7, IXR11,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
LOC_Os03g47016.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
LOC_Os07g03770.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Len_g00731	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g44272	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g05715	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g27135	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g19225	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c19_5620V3.1	BP, BP1, KNAT1,...	KNOTTED-like from Arabidopsis thaliana 2	0.01	OrthoFinder output from all 47 species
Ppi_g10499	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16367	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004352	KNAT4	KNOX-type transcription factor & original description: CDS=1-1356	0.03	OrthoFinder output from all 47 species
Sam_g40671	No alias	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Smo415291	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e005547_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
Zm00001e011538_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e017489_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Zm00001e027562_P001	KNAT6, KNAT6L,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008422	Homeobox_KN_domain	254	293
IPR005541	KNOX2	106	157
IPR005540	KNOX1	50	90

External Links

No external refs found!

Zm00001e000173_P003 (KNAT7, IXR11, Zm00001e000173)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation