Zm00001e000163_P001 (PRPL11, Zm00001e000163)

Aliases : PRPL11, Zm00001e000163

Description : component psRPL11 of large ribosomal subunit proteome

Gene families : OG0007074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007074_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e000163_P001
Cluster	HCCA: Cluster_114

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272010	PRPL11,...	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
AT1G32990	PRPL11	plastid ribosomal protein l11	0.31	OrthoFinder output from all 47 species
Adi_g019225	PRPL11	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g24656	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Ala_g12058	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Als_g00538	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Aob_g13607	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Aop_g01017	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Aspi01Gene51098.t1	PRPL11, Aspi01Gene51098	component *(uL11c) of large plastid ribosomal-subunit...	0.06	OrthoFinder output from all 47 species
Azfi_s0591.g078746	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.15	OrthoFinder output from all 47 species
Cba_g10687	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Ceric.03G039700.1	PRPL11, Ceric.03G039700	component *(uL11c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Cre10.g423650	PRPL11	Protein biosynthesis.organelle translation...	0.18	OrthoFinder output from all 47 species
Dac_g28507	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Dde_g08872	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species
Ehy_g02085	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
GSVIVT01019689001	PRPL11	Protein biosynthesis.organelle translation...	0.2	OrthoFinder output from all 47 species
Gb_12514	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.15	OrthoFinder output from all 47 species
LOC_Os03g03020.1	PRPL11, LOC_Os03g03020	component psRPL11 of large ribosomal subunit proteome	0.34	OrthoFinder output from all 47 species
Len_g25437	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.08	OrthoFinder output from all 47 species
Lfl_g13039	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
MA_26087g0010	PRPL11	50S ribosomal protein L11, chloroplastic OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_368887g0010	PRPL11	50S ribosomal protein L11, chloroplastic OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Mp7g12110.1	PRPL11	component psRPL11 of large ribosomal subunit proteome	0.33	OrthoFinder output from all 47 species
Nbi_g11504	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Pir_g17849	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Pp3c10_12450V3.1	PRPL11, Pp3c10_12450	plastid ribosomal protein l11	0.11	OrthoFinder output from all 47 species
Pp3c12_19370V3.1	PRPL11, Pp3c12_19370	plastid ribosomal protein l11	0.07	OrthoFinder output from all 47 species
Pp3c3_20370V3.1	PRPL11, Pp3c3_20370	plastid ribosomal protein l11	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0122.g021434	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.13	OrthoFinder output from all 47 species
Sam_g06585	No alias	component *(uL11c) of large plastid ribosomal-subunit...	0.11	OrthoFinder output from all 47 species
Smo230830	PRPL11	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Solyc08g083350.4.1	PRPL11, Solyc08g083350	component psRPL11 of large ribosomal subunit proteome	0.28	OrthoFinder output from all 47 species
Spa_g16220	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
Tin_g17431	PRPL11	component *(uL11c) of large plastid ribosomal-subunit...	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0033013	tetrapyrrole metabolic process	IEP	HCCA
BP	GO:0033014	tetrapyrrole biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051920	peroxiredoxin activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020784	Ribosomal_L11_N	67	131
IPR020783	Ribosomal_L11_C	136	204

External Links

No external refs found!

Zm00001e000163_P001 (PRPL11, Zm00001e000163)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation