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  5. Zm00001e000082_P001

Zm00001e000082_P001 (AtHPR1, AtTHO1, THO1,...)


Aliases : AtHPR1, AtTHO1, THO1, HPR1, Zm00001e000082

Description : component THOC1/HPR1 of mRNP trafficking THO subcomplex


Gene families : OG0005828 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e000082_P001

Target Alias Description ECC score Gene Family Method Actions
Adi_g025989 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.03 OrthoFinder output from all 47 species
Aev_g07899 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001229.4 AtHPR1, AtTHO1,... RNA processing.messenger ribonucleoprotein particle... 0.01 OrthoFinder output from all 47 species
Dcu_g09998 AtHPR1, AtTHO1,... component *(THOC1/HPR1) of mRNP trafficking THO... 0.02 OrthoFinder output from all 47 species
Smo96989 AtHPR1, AtTHO1,... RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Solyc01g096600.4.1 AtHPR1, AtTHO1,... component THOC1/HPR1 of mRNP trafficking THO subcomplex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021861 THO_THOC1 123 536
No external refs found!