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  5. Gb_41826

Gb_41826


Description : amino acid transporter (LAT)


Gene families : OG0000891 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000891_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41826

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
AMTR_s00144p00042270 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AMTR_s00217p00018260 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Cre06.g292350 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01025423001 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
LOC_Os12g39080.1 LOC_Os12g39080 amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Msp_g09316 No alias amino acid transporter *(LAT) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005247 No alias amino acid transporter *(LAT) & original description: CDS=1-1461 0.04 OrthoFinder output from all 47 species
Solyc01g005900.2.1 Solyc01g005900 amino acid transporter (LAT) 0.06 OrthoFinder output from all 47 species
Solyc01g005920.3.1 Solyc01g005920 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species
Solyc08g075710.3.1 Solyc08g075710 amino acid transporter (LAT) 0.04 OrthoFinder output from all 47 species
Zm00001e001820_P001 Zm00001e001820 amino acid transporter (LAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 56 419
No external refs found!