Gb_41697


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 219.0)


Gene families : OG0000009 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41697

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00163p00055330 No alias No description available 0.03 OrthoFinder output from all 47 species
Adi_g005807 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g029938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g040367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g041199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046450 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g079804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g102013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g103654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g129783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g19508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21814 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g26449 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g32861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33411 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43440 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g43660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12244 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20710 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04064 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12063 ORF120 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g30957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00518.t1 ORF120, Aspi01Gene00518 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04886.t1 Aspi01Gene04886 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08134.t1 Aspi01Gene08134 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10667.t1 ORF120, Aspi01Gene10667 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16660.t1 Aspi01Gene16660 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22968.t1 Aspi01Gene22968 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene29587.t1 Aspi01Gene29587 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32979.t1 Aspi01Gene32979 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33527.t1 Aspi01Gene33527 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35033.t1 ORF120, Aspi01Gene35033 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37639.t1 Aspi01Gene37639 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44452.t1 Aspi01Gene44452 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45192.t1 Aspi01Gene45192 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49400.t1 Aspi01Gene49400 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54200.t1 ORF240B, Aspi01Gene54200 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54300.t1 Aspi01Gene54300 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54301.t3 ORF145A, Aspi01Gene54301 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59054.t1 ORF120, Aspi01Gene59054 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63791.t1 Aspi01Gene63791 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65786.t1 Aspi01Gene65786 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72777.t1 Aspi01Gene72777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g48953 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40272 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g14985 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g15017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42054 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13862 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28000 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g31952 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_00288 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_00777 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_05294 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_05523 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_06074 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_06223 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_06978 ORF145A Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_08105 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_10322 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_13701 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_13962 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_14301 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_16799 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_21518 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_23548 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_24597 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_26975 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_27945 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_28242 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_29350 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_29546 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 OrthoFinder output from all 47 species
Gb_30240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_30261 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_30314 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30317 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_33365 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_33414 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_33583 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Gb_37775 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Gb_38122 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 OrthoFinder output from all 47 species
Gb_38136 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 OrthoFinder output from all 47 species
Gb_39221 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.01 OrthoFinder output from all 47 species
Gb_39504 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_40566 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_41335 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 OrthoFinder output from all 47 species
Len_g27574 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g36364 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g10768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12630 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12768 ORF145A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34647 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g31967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16647 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18328 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27459 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30553 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33806 ORF120 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c20_3370V3.1 Pp3c20_3370 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c26_8890V3.1 Pp3c26_8890 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g56332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g40213 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 50 165
No external refs found!