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  5. Gb_41518

Gb_41518


Description : Probable pectinesterase 8 OS=Arabidopsis thaliana (sp|o23038|pme8_arath : 186.0)


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41518

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00206660 evm_27.TU.AmTr_v1... Pectinesterase QRT1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g00830 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11068 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17627 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001327001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Len_g07605 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
MA_28575g0010 No alias pectin methylesterase 0.06 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.01 OrthoFinder output from all 47 species
Nbi_g12594 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g32791 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47255 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27683 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007306_P001 Zm00001e007306 pectin methylesterase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 99 210
No external refs found!