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  5. Gb_41517

Gb_41517


Description : transcription factor (SBP)


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41517
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT2G47070 SPL1 squamosa promoter binding protein-like 1 0.07 OrthoFinder output from all 47 species
AT3G60030 SPL12 squamosa promoter-binding protein-like 12 0.03 OrthoFinder output from all 47 species
Adi_g113329 SPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g125517 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32302 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12284 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028208001 SPL1 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
LOC_Os01g18850.1 SPL1, LOC_Os01g18850 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_10434066g0020 No alias Squamosa promoter-binding-like protein 15 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Pir_g36989 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009405 SPL12 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Solyc01g068100.4.1 SPL1, Solyc01g068100 Squamosa promoter-binding-like protein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 152 225
No external refs found!