1. Home
  2. Species
  3. Ginkgo biloba
  4. Sequence
  5. Gb_41415

Gb_41415 (GH3.5, WES1)


Aliases : GH3.5, WES1

Description : indole-3-acetic acid-amido synthetase


Gene families : OG0000376 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000376_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41415
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00043p00208540 DFL1, GH3.6,... Phytohormones.auxin.conjugation and... 0.03 OrthoFinder output from all 47 species
AT1G23160 No alias Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
AT1G59500 GH3.4 Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
AT2G14960 GH3.1 Auxin-responsive GH3 family protein 0.04 OrthoFinder output from all 47 species
AT2G23170 GH3.3 Auxin-responsive GH3 family protein 0.03 OrthoFinder output from all 47 species
AT2G47750 GH3.9 putative indole-3-acetic acid-amido synthetase GH3.9 0.04 OrthoFinder output from all 47 species
AT5G51470 No alias Auxin-responsive GH3 family protein 0.05 OrthoFinder output from all 47 species
Adi_g102139 DFL1, GH3.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g46633 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene00423.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00424.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00425.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene00426.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03301.t1 GH3.5, WES1,... indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33576.t1 DFL1, GH3.6,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20850 DFL1, GH3.6 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.08G060800.1 DFL1, GH3.6,... not classified & original description: pacid=50637832... 0.06 OrthoFinder output from all 47 species
Dcu_g03008 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.06 OrthoFinder output from all 47 species
Dde_g08813 GH3.5, WES1 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01027971001 GH3.9 Putative indole-3-acetic acid-amido synthetase GH3.9... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32510.1 GH3.17, LOC_Os11g32510 Indole-3-acetic acid-amido synthetase GH3.17... 0.03 OrthoFinder output from all 47 species
LOC_Os11g32520.1 GH3.17, LOC_Os11g32520 Probable indole-3-acetic acid-amido synthetase GH3.13... 0.03 OrthoFinder output from all 47 species
Len_g24156 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10178158g0010 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.04 OrthoFinder output from all 47 species
Msp_g43816 DFL1, GH3.6 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g39122 GH3.5, WES1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11120 GH3.5, WES1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31410 GH3.5, WES1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo119116 DFL1, GH3.6 Indole-3-acetic acid-amido synthetase GH3.6... 0.02 OrthoFinder output from all 47 species
Spa_g16307 DFL1, GH3.6 indole-3-acetic acid-amido synthetase *(GH3) & original... 0.04 OrthoFinder output from all 47 species
Tin_g31695 GH3.5, WES1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0010112 regulation of systemic acquired resistance IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
InterPro domains Description Start Stop
IPR004993 GH3 16 567
No external refs found!