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  5. Gb_41260

Gb_41260 (CRK8)


Aliases : CRK8

Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 226.0)


Gene families : OG0000011 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41260
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Aev_g30399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_08424 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.08 OrthoFinder output from all 47 species
Gb_09614 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_14660 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Gb_15074 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_16945 ORF111A Retrovirus-related Pol polyprotein from transposon RE1... 0.06 OrthoFinder output from all 47 species
Gb_19936 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.15 OrthoFinder output from all 47 species
Gb_20056 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_20738 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Gb_23035 CRK8 Retrovirus-related Pol polyprotein from transposon RE1... 0.05 OrthoFinder output from all 47 species
Gb_27234 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Gb_29290 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_32814 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 OrthoFinder output from all 47 species
Gb_38369 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Gb_39735 ORF240B Retrovirus-related Pol polyprotein from transposon RE1... 0.1 OrthoFinder output from all 47 species
Gb_40731 ORF111A Retrovirus-related Pol polyprotein from transposon RE2... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013103 RVT_2 5 84
No external refs found!