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  5. Gb_41243

Gb_41243


Description : component mtRPS5 of small ribosomal subunit proteome


Gene families : OG0006684 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006684_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41243
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AT1G64880 No alias Ribosomal protein S5 family protein 0.06 OrthoFinder output from all 47 species
Aop_g06420 No alias component *(uS5m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cre09.g407100 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g09044 No alias component *(uS5m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ehy_g00833 No alias component *(uS5m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01020716001 No alias Protein biosynthesis.organelle translation... 0.06 OrthoFinder output from all 47 species
LOC_Os02g01230.1 LOC_Os02g01230 component mtRPS5 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
MA_955371g0010 No alias component mtRPS5 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Solyc11g008710.2.1 Solyc11g008710 component mtRPS5 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species
Tin_g09524 No alias component *(uS5m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 372 435
IPR005324 Ribosomal_S5_C 448 517
No external refs found!