Aliases : OTP86
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 648.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00175270 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g31790... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g37786 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g38061 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Gb_02573 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
Gb_02808 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03691 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06568 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07336 | EMB2261 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_07570 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_09361 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13227 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
Gb_14459 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_15235 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15644 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15797 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_18263 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_18436 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.08 | OrthoFinder output from all 47 species | |
Gb_18979 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_22477 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_25046 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_26340 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
Gb_28758 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_28762 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_28764 | CRR2 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
Gb_28770 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_28775 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_29872 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.06 | OrthoFinder output from all 47 species | |
Gb_29878 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.06 | OrthoFinder output from all 47 species | |
Gb_31319 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | OrthoFinder output from all 47 species | |
Gb_33311 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
Gb_33367 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_33719 | No alias | RNA editing factor (OTP82) | 0.06 | OrthoFinder output from all 47 species | |
Gb_33727 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_36177 | REME1 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36178 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_37254 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_38292 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Gb_38504 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_38750 | No alias | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_39702 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_40381 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_40680 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_41341 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_41801 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
MA_117650g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
MA_210089g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
MA_481619g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.04 | OrthoFinder output from all 47 species | |
MA_52613g0020 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
MA_53781g0010 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Smo17005 | PDE247, CLB19 | Pentatricopeptide repeat-containing protein At2g17210... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g29031 | REME1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 401 | 428 |
IPR002885 | Pentatricopeptide_repeat | 268 | 299 |
IPR032867 | DYW_dom | 933 | 1057 |
IPR002885 | Pentatricopeptide_repeat | 568 | 593 |
IPR002885 | Pentatricopeptide_repeat | 834 | 859 |
IPR002885 | Pentatricopeptide_repeat | 242 | 266 |
IPR002885 | Pentatricopeptide_repeat | 540 | 563 |
IPR002885 | Pentatricopeptide_repeat | 214 | 241 |
IPR002885 | Pentatricopeptide_repeat | 377 | 399 |
IPR002885 | Pentatricopeptide_repeat | 659 | 705 |
IPR002885 | Pentatricopeptide_repeat | 434 | 463 |
IPR002885 | Pentatricopeptide_repeat | 464 | 512 |
IPR002885 | Pentatricopeptide_repeat | 301 | 349 |
IPR002885 | Pentatricopeptide_repeat | 760 | 808 |
IPR002885 | Pentatricopeptide_repeat | 596 | 628 |
IPR002885 | Pentatricopeptide_repeat | 139 | 187 |
No external refs found! |