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  5. Gb_41091

Gb_41091 (4CL3)


Aliases : 4CL3

Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_41091

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00213640 4CL1, AT4CL1,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00217510 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00217630 ACOS5,... 4-coumarate--CoA ligase-like 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00101790 4CL3,... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.07 OrthoFinder output from all 47 species
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.05 OrthoFinder output from all 47 species
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.06 OrthoFinder output from all 47 species
AT1G65060 4CL3 4-coumarate:CoA ligase 3 0.09 OrthoFinder output from all 47 species
Adi_g103472 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Adi_g115638 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Aev_g02337 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ala_g24085 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Als_g22886 4CL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Aob_g06612 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Aop_g17905 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0003.g007625 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0027.g023677 ACOS5 not classified & original description: CDS=1-1590 0.03 OrthoFinder output from all 47 species
Azfi_s0114.g046013 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Cba_g34238 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Cba_g41839 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G038600.1 4CL3, Ceric.12G038600 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G077900.1 4CL3, Ceric.12G077900 not classified & original description: pacid=50601305... 0.03 OrthoFinder output from all 47 species
Ceric.15G048400.1 4CL3, Ceric.15G048400 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
Ceric.1Z155100.1 4CL3, Ceric.1Z155100 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G041000.1 ACOS5, Ceric.33G041000 acyl-CoA synthetase *(ACS5) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g07017 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.07 OrthoFinder output from all 47 species
Dcu_g09728 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g17383 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24331 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Dde_g31145 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20793 AT4CL2, 4CL2 EC_6.2 ligase forming carbon-sulfur bond & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01010497001 ACOS5 Cell wall.sporopollenin.synthesis.ACS5 acyl-CoA synthetase 0.05 OrthoFinder output from all 47 species
GSVIVT01024400001 4CL3 4-coumarate--CoA ligase 2 OS=Glycine max 0.13 OrthoFinder output from all 47 species
GSVIVT01029182001 4CL1, AT4CL1, 4CL.1 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
GSVIVT01029183001 AT4CL2, 4CL2 4-coumarate--CoA ligase 1 OS=Nicotiana tabacum 0.06 OrthoFinder output from all 47 species
LOC_Os02g08100.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 OrthoFinder output from all 47 species
LOC_Os02g46970.1 4CL3, LOC_Os02g46970 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 OrthoFinder output from all 47 species
LOC_Os04g24530.1 ACOS5, LOC_Os04g24530 acyl-CoA synthetase (ACS5) 0.05 OrthoFinder output from all 47 species
LOC_Os06g44620.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
LOC_Os08g14760.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.02 OrthoFinder output from all 47 species
LOC_Os08g34790.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 OrthoFinder output from all 47 species
MA_109119g0010 4CL3 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.1 OrthoFinder output from all 47 species
MA_8946476g0010 ACOS5 acyl-CoA synthetase (ACS5) 0.03 OrthoFinder output from all 47 species
Mp5g01200.1 4CL1, AT4CL1, 4CL.1 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 OrthoFinder output from all 47 species
Nbi_g04314 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Nbi_g28739 ACOS5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10215 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Ore_g32420 4CL1, AT4CL1, 4CL.1 EC_6.2 ligase forming carbon-sulfur bond & original... 0.02 OrthoFinder output from all 47 species
Ore_g34152 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Ore_g42310 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g08302 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g51306 No alias acyl-CoA synthetase *(ACS5) & original description: none 0.02 OrthoFinder output from all 47 species
Smo177393 AT4CL2, 4CL2 Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 OrthoFinder output from all 47 species
Solyc02g088710.3.1 ACOS5, Solyc02g088710 acyl-CoA synthetase (ACS5) 0.05 OrthoFinder output from all 47 species
Solyc03g097030.3.1 4CL3, Solyc03g097030 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.11 OrthoFinder output from all 47 species
Solyc03g117870.3.1 AT4CL2, 4CL2,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 OrthoFinder output from all 47 species
Solyc07g008360.2.1 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 OrthoFinder output from all 47 species
Spa_g07084 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.04 OrthoFinder output from all 47 species
Spa_g47039 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g07442 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.03 OrthoFinder output from all 47 species
Tin_g11239 ACOS5 acyl-CoA synthetase *(ACS5) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13836 4CL3 EC_6.2 ligase forming carbon-sulfur bond & original... 0.06 OrthoFinder output from all 47 species
Zm00001e008138_P001 ACOS5, Zm00001e008138 acyl-CoA synthetase (ACS5) 0.07 OrthoFinder output from all 47 species
Zm00001e013798_P002 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species
Zm00001e016374_P001 ACOS5, Zm00001e016374 acyl-CoA synthetase (ACS5) 0.05 OrthoFinder output from all 47 species
Zm00001e023286_P002 4CL3, Zm00001e023286 p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.08 OrthoFinder output from all 47 species
Zm00001e037698_P001 4CL1, AT4CL1,... p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 499 574
IPR000873 AMP-dep_Synth/Lig_com 80 490
No external refs found!