AMTR_s00056p00176290 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00056.156

Description : Leucine-rich repeat extensin-like protein 3 OS=Arabidopsis thaliana


Gene families : OG_01_0000279 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000279_tree ,
OG_02_0000206 (LandPlants) Phylogenetic Tree(s): OG_02_0000206_tree ,
OG_03_0000158 (SeedPlants) Phylogenetic Tree(s): OG_03_0000158_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00056p00176290
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.02 Archaeplastida
AT1G49490 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.04 Archaeplastida
AT3G19320 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.04 Archaeplastida
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.09 Archaeplastida
GSVIVT01009442001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01034267001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.06 Archaeplastida
Gb_12380 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.03 Archaeplastida
Gb_29819 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g40260.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os03g43650.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os03g55014.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g42620.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os05g08770.2 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.08 Archaeplastida
LOC_Os06g49100.1 No alias LRR-domain extensin 0.04 Archaeplastida
MA_100985g0010 No alias LRR-domain extensin 0.04 Archaeplastida
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.02 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.02 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.03 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.05 Archaeplastida
Smo81544 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Solyc07g053840.1.1 No alias LRR-domain extensin 0.05 Archaeplastida
Solyc09g082530.3.1 No alias LRR-domain extensin 0.04 Archaeplastida
Solyc10g050110.1.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e005974_P001 No alias LRR-domain extensin 0.02 Archaeplastida
Zm00001e007641_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e011874_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e015109_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e026840_P001 No alias LRR-domain extensin 0.06 Archaeplastida
Zm00001e030216_P001 No alias LRR-domain extensin 0.03 Archaeplastida
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.07 Archaeplastida
Zm00001e041184_P001 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00160p00027170 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 LandPlants
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 LandPlants
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.02 LandPlants
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.05 LandPlants
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.03 LandPlants
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.07 LandPlants
Gb_08992 No alias LRR-domain extensin 0.02 LandPlants
Gb_10910 No alias LRR-domain extensin 0.05 LandPlants
Gb_12380 No alias LRR-domain extensin 0.04 LandPlants
Gb_26318 No alias LRR-domain extensin 0.02 LandPlants
Gb_27021 No alias LRR-domain extensin 0.02 LandPlants
Gb_29819 No alias LRR-domain extensin 0.04 LandPlants
LOC_Os02g04540.1 No alias LRR-domain extensin 0.03 LandPlants
LOC_Os03g55014.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os05g08770.2 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.04 LandPlants
LOC_Os06g49100.1 No alias LRR-domain extensin 0.04 LandPlants
MA_100985g0010 No alias LRR-domain extensin 0.02 LandPlants
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.01 LandPlants
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.04 LandPlants
Solyc07g053840.1.1 No alias LRR-domain extensin 0.02 LandPlants
Solyc09g082530.3.1 No alias LRR-domain extensin 0.02 LandPlants
Solyc12g006973.1.1 No alias LRR-domain extensin 0.01 LandPlants
Zm00001e026840_P001 No alias LRR-domain extensin 0.04 LandPlants
Zm00001e030216_P001 No alias LRR-domain extensin 0.03 LandPlants
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 LandPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.05 LandPlants
AT1G62440 LRX2 leucine-rich repeat/extensin 2 0.03 SeedPlants
AT2G15880 No alias Leucine-rich repeat (LRR) family protein 0.02 SeedPlants
AT3G22800 No alias Leucine-rich repeat (LRR) family protein 0.01 SeedPlants
AT4G18670 No alias Leucine-rich repeat (LRR) family protein 0.04 SeedPlants
AT4G28380 No alias Leucine-rich repeat (LRR) family protein 0.02 SeedPlants
AT4G29240 No alias Leucine-rich repeat (LRR) family protein 0.06 SeedPlants
Gb_08992 No alias LRR-domain extensin 0.02 SeedPlants
Gb_10910 No alias LRR-domain extensin 0.02 SeedPlants
Gb_26318 No alias LRR-domain extensin 0.02 SeedPlants
Gb_27021 No alias LRR-domain extensin 0.02 SeedPlants
Gb_29819 No alias LRR-domain extensin 0.02 SeedPlants
LOC_Os01g41120.1 No alias LRR-domain extensin 0.02 SeedPlants
LOC_Os02g04540.1 No alias LRR-domain extensin 0.03 SeedPlants
LOC_Os05g08770.2 No alias LRR-domain extensin 0.01 SeedPlants
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.04 SeedPlants
LOC_Os06g49100.1 No alias LRR-domain extensin 0.04 SeedPlants
Solyc07g053840.1.1 No alias LRR-domain extensin 0.02 SeedPlants
Solyc12g006973.1.1 No alias LRR-domain extensin 0.01 SeedPlants
Zm00001e026840_P001 No alias LRR-domain extensin 0.04 SeedPlants
Zm00001e030216_P001 No alias LRR-domain extensin 0.03 SeedPlants
Zm00001e031217_P001 No alias Leucine-rich repeat extensin-like protein 4... 0.03 SeedPlants
Zm00001e031241_P001 No alias LRR-domain extensin 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 160 177
IPR001611 Leu-rich_rpt 184 205
IPR013210 LRR_N_plant-typ 68 101
No external refs found!