Gb_40913


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 145.0)


Gene families : OG0000004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40913

Target Alias Description ECC score Gene Family Method Actions
Adi_g005750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g007395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g016156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021634 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g032390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g037480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g038928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g040807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g050069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g052984 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g053857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059665 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g116474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g130110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15529 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g28692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g45052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18425 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g65869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31527.t1 Aspi01Gene31527 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40360.t1 Aspi01Gene40360 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41179.t1 CRK8, Aspi01Gene41179 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42777.t1 Aspi01Gene42777 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62930.t1 CRK8, Aspi01Gene62930 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G036400.1 Ceric.07G036400 not classified & original description: pacid=50626002... 0.03 OrthoFinder output from all 47 species
Ceric.12G002800.1 Ceric.12G002800 not classified & original description: pacid=50601008... 0.02 OrthoFinder output from all 47 species
Ceric.12G025000.1 Ceric.12G025000 not classified & original description: pacid=50601304... 0.03 OrthoFinder output from all 47 species
Ceric.13G016000.1 Ceric.13G016000 not classified & original description: pacid=50636669... 0.03 OrthoFinder output from all 47 species
Ceric.16G048700.1 Ceric.16G048700 not classified & original description: pacid=50589460... 0.03 OrthoFinder output from all 47 species
Ceric.21G079700.1 Ceric.21G079700 not classified & original description: pacid=50603141... 0.02 OrthoFinder output from all 47 species
Ceric.22G076900.1 Ceric.22G076900 not classified & original description: pacid=50614764... 0.03 OrthoFinder output from all 47 species
Ceric.23G035000.1 Ceric.23G035000 not classified & original description: pacid=50610725... 0.03 OrthoFinder output from all 47 species
Ceric.24G080000.1 Ceric.24G080000 not classified & original description: pacid=50628615... 0.03 OrthoFinder output from all 47 species
Ceric.35G004700.1 CRK8, Ceric.35G004700 not classified & original description: pacid=50581602... 0.03 OrthoFinder output from all 47 species
Ceric.35G009500.1 CRK8, Ceric.35G009500 not classified & original description: pacid=50581405... 0.03 OrthoFinder output from all 47 species
Ehy_g12034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13372 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18937 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g25196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g25505 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27517 No alias Bowman-Birk protease inhibitor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g32238 CRK8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g32242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15114 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 OrthoFinder output from all 47 species
Gb_22123 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 OrthoFinder output from all 47 species
Gb_26259 CRK8 Retrovirus-related Pol polyprotein from transposon TNT... 0.04 OrthoFinder output from all 47 species
Len_g09845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g40153 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35118 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35296 CRK8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g40387 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29648 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g07145 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47134 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22481 ORF240B not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27169 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c10_20080V3.1 Pp3c10_20080 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c12_15570V3.1 Pp3c12_15570 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c15_1610V3.1 Pp3c15_1610 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c17_2840V3.1 Pp3c17_2840 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c19_10910V3.1 Pp3c19_10910 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3c1_21700V3.1 Pp3c1_21700 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c22_3860V3.1 Pp3c22_3860 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c24_16280V3.1 Pp3c24_16280 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c3_32070V3.1 Pp3c3_32070 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c3_36040V3.1 Pp3c3_36040 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.01 OrthoFinder output from all 47 species
Pp3c4_15120V3.1 Pp3c4_15120 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c4_5390V3.1 Pp3c4_5390 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c5_14290V3.1 Pp3c5_14290 No annotation 0.01 OrthoFinder output from all 47 species
Pp3c6_1560V3.1 Pp3c6_1560 No annotation 0.03 OrthoFinder output from all 47 species
Pp3c8_19680V3.1 Pp3c8_19680 No annotation 0.02 OrthoFinder output from all 47 species
Pp3c9_1850V3.1 Pp3c9_1850 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Pp3s38_160V3.1 CRK8, Pp3s38_160 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 0.02 OrthoFinder output from all 47 species
Tin_g16067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!