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  5. Gb_40829

Gb_40829


Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_40829

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
Ala_g10321 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31869 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37842 SPT bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14321 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13223.t1 HEC1, Aspi01Gene13223 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49717.t1 LRL3, Aspi01Gene49717 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000265 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Azfi_s0113.g045847 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ceric.17G079100.1 Ceric.17G079100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.28G002800.1 Ceric.28G002800 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
GSVIVT01010126001 No alias External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
GSVIVT01023585001 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01031020001 BEE3 External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
GSVIVT01031338001 PIF3, POC1, PAP3 External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
Gb_13867 PIF3, POC1, PAP3 transcription factor (bHLH). PIF red/far-red light... 0.04 OrthoFinder output from all 47 species
Gb_33185 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
LOC_Os02g55250.1 LRL3, LOC_Os02g55250 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os08g41320.1 LOC_Os08g41320 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
MA_90272g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Msp_g05645 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18384 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33726 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006234 No alias bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Solyc02g070880.1.1 Solyc02g070880 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g077480.3.1 Solyc04g077480 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc05g010610.3.1 Solyc05g010610 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Spa_g57226 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.07 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e019392_P001 Zm00001e019392 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e030725_P001 Zm00001e030725 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e037266_P001 Zm00001e037266 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 225 282
No external refs found!